Gene detail

Detailed information of OS493_027560-T1 in Lophelia pertusa

Genomic Location: scaffold_151:261368...269745
NR annotation: KAJ7390035.1, hypothetical protein OS493_027560 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A2RRU4	Sterol regulatory element-binding protein cleavage-activating protein OS=Rattus norvegicus OX=10116 GN=Scap PE=2 SV=1
Q6GQT6	Sterol regulatory element-binding protein cleavage-activating protein OS=Mus musculus OX=10090 GN=Scap PE=1 SV=1
P97260	Sterol regulatory element-binding protein cleavage-activating protein OS=Cricetulus griseus OX=10029 GN=SCAP PE=1 SV=1

Gene family

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR030225	Family	Sterol regulatory element-binding protein cleavage-activating protein	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46378	STEROL REGULATORY ELEMENT-BINDING PROTEIN CLEAVAGE-ACTIVATING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000139	Cellular Component	Golgi membrane	Interproscan
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0032933	Biological Process	SREBP signaling pathway	Interproscan
GO:0032934	Molecular Function	sterol binding	Interproscan
GO:0032936	Cellular Component	SREBP-SCAP complex	Interproscan
GO:0045540	Biological Process	regulation of cholesterol biosynthetic process	Interproscan

Expression pattern