Detailed information of OS493_027406-T1 in Lophelia pertusa

Genomic Location: scaffold_149:366180...369736
NR annotation: KAJ7356010.1, Charged multivesicular body protein 4b [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9D8B3Charged multivesicular body protein 4b OS=Mus musculus OX=10090 GN=Chmp4b PE=1 SV=2
Q6GL11Charged multivesicular body protein 4b OS=Xenopus tropicalis OX=8364 GN=chmp4b PE=2 SV=1
Q5XGW6Charged multivesicular body protein 4b OS=Xenopus laevis OX=8355 GN=chmp4b PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03357Snf7Snf7FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005024FamilySnf7 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22761CHARGED MULTIVESICULAR BODY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007034Biological Processvacuolar transportInterproscan
GO:0000815Cellular ComponentESCRT III complexInterproscan
GO:0005771Cellular Componentmultivesicular bodyInterproscan
GO:0006900Biological Processvesicle budding from membraneInterproscan
GO:0009898Cellular Componentcytoplasmic side of plasma membraneInterproscan
GO:0032511Biological Processlate endosome to vacuole transport via multivesicular body sorting pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12194CHMP4A_B, SNF7, VPS32A_B; charged multivesicular body protein 4A/B-Exosomeko04147deepkoala

Expression pattern
 Expression trend for OS493_027406-T1 global co-expression network
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