Detailed information of OS493_027359-T1 in Lophelia pertusa

Genomic Location: scaffold_148:563701...584499
NR annotation: KAJ7371245.1, E3 ubiquitin-protein ligase herc2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4U2R1E3 ubiquitin-protein ligase HERC2 OS=Mus musculus OX=10090 GN=Herc2 PE=1 SV=3
O95714E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens OX=9606 GN=HERC2 PE=1 SV=2
Q9VR91Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster OX=7227 GN=HERC2 PE=1 SV=3
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00415RCC1Regulator of chromosome condensation (RCC1) repeatRepeatInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000408RepeatRegulator of chromosome condensation, RCC1Interproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR000569DomainHECT domainInterproscan
IPR009091Homologous_superfamilyRegulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIInterproscan
IPR051210FamilyUbiquitin ligases and GEF domain-containing proteinInterproscan
IPR004939DomainAPC10/DOC domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22870REGULATOR OF CHROMOSOME CONDENSATIONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10595HERC2; E3 ubiquitin-protein ligase HERC2EC:2.3.2.26
DNA repair and recombination proteinsko03400deepkoala

Expression pattern
 Expression trend for OS493_027359-T1 global co-expression network
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