Detailed information of OS493_027284-T1 in Lophelia pertusa

Genomic Location: scaffold_147:675208...678576
NR annotation: KAJ7377722.1, Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UET6tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Homo sapiens OX=9606 GN=FTSJ1 PE=1 SV=2
Q8CBC7tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Mus musculus OX=10090 GN=Ftsj1 PE=1 SV=1
Q22031Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Caenorhabditis elegans OX=6239 GN=R74.7 PE=3 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01728FtsJFtsJ-like methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002877DomainRibosomal RNA methyltransferase, FtsJ domainInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR050082FamilyRibosomal RNA large subunit methyltransferase RlmEInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10920RIBOSOMAL RNA METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0032259Biological ProcessmethylationInterproscan
GO:0001510Biological ProcessRNA methylationInterproscan
GO:0002181Biological Processcytoplasmic translationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0008175Molecular FunctiontRNA methyltransferase activityInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14864FTSJ1, TRM7; tRNA (cytidine32/guanosine34-2'-O)-methyltransferaseEC:2.1.1.205
Transfer RNA biogenesisko03016deepkoala

Expression pattern
 Expression trend for OS493_027284-T1 global co-expression network
TOP