Detailed information of OS493_027215-T1 in Lophelia pertusa

Genomic Location: scaffold_146:634139...657713
NR annotation: KAJ7383552.1, hypothetical protein OS493_027215, partial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q62381Tolloid-like protein 1 OS=Mus musculus OX=10090 GN=Tll1 PE=1 SV=1
F7J220Scavenger receptor cysteine-rich domain superfamily protein OS=Patiria pectinifera OX=7594 GN=SRCR1 PE=1 SV=1
Q8JI28Tolloid-like protein 1 OS=Xenopus laevis OX=8355 GN=tll1 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF04564U-boxU-box domainDomainInterproscan
PF01822WSCWSC domainDomainInterproscan
PF00431CUBCUB domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001190DomainSRCR domainInterproscan
IPR003613DomainU-box domainInterproscan
IPR000859DomainCUB domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR050841FamilyDevelopmental metalloproteases and endocytic receptorsInterproscan
IPR017448DomainSRCR-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24251OVOCHYMASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan

Expression pattern
 Expression trend for OS493_027215-T1 global co-expression network
TOP