Detailed information of OS493_026928-T1 in Lophelia pertusa

Genomic Location: scaffold_142:301642...302775
NR annotation: KAJ7371284.1, hypothetical protein OS493_026928 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q91VY9Cytoplasmic 60S subunit biogenesis factor ZNF622 OS=Mus musculus OX=10090 GN=Znf622 PE=1 SV=1
Q969S3Cytoplasmic 60S subunit biogenesis factor ZNF622 OS=Homo sapiens OX=9606 GN=ZNF622 PE=1 SV=1
Q90Y35Cytoplasmic 60S subunit biogenesis factor ZNF622 OS=Gallus gallus OX=9031 GN=ZNF622 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12171zf-C2H2_jazZinc-finger double-stranded RNA-bindingFamilyInterproscan
PF12756zf-C2H2_2C2H2 type zinc-finger (2 copies)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR022755DomainZinc finger, double-stranded RNA bindingInterproscan
IPR041661DomainZN622/Rei1/Reh1, zinc finger C2H2-typeInterproscan
IPR040025FamilyZinc finger protein 622/Rei1/Reh1Interproscan
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13182ZINC FINGER PROTEIN 622Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030687Cellular Componentpreribosome, large subunit precursorInterproscan
GO:0042273Biological Processribosomal large subunit biogenesisInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14816REI1; pre-60S factor REI1-Ribosome biogenesisko03009deepkoala

Expression pattern
 Expression trend for OS493_026928-T1 global co-expression network
TOP