Detailed information of OS493_026826-T1 in Lophelia pertusa

Genomic Location: scaffold_140:687616...692341
NR annotation: KAJ7383640.1, Methylosome protein 50 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6NUD0Methylosome protein WDR77 OS=Xenopus laevis OX=8355 GN=wdr77 PE=1 SV=1
Q9BQA1Methylosome protein WDR77 OS=Homo sapiens OX=9606 GN=WDR77 PE=1 SV=1
Q5RBZ2Methylosome protein WDR77 OS=Pongo abelii OX=9601 GN=WDR77 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR052139FamilyMethylosome Component WDR77Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46853METHYLOSOME PROTEIN 50Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0034709Cellular ComponentmethylosomeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13221WDR77, MEP50; methylosome protein 50-Spliceosomeko03041deepkoala

Expression pattern
 Expression trend for OS493_026826-T1 global co-expression network
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