Detailed information of OS493_026813-T1 in Lophelia pertusa

Genomic Location: scaffold_140:589034...601195
NR annotation: KAJ7383627.1, Protein transport protein Sec31A [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5R4F4Protein transport protein Sec31A OS=Pongo abelii OX=9601 GN=SEC31A PE=2 SV=1
O94979Protein transport protein Sec31A OS=Homo sapiens OX=9606 GN=SEC31A PE=1 SV=3
Q9Z2Q1Protein transport protein Sec31A OS=Rattus norvegicus OX=10116 GN=Sec31a PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF12931Sec16_CSec23-binding domain of Sec16DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR024298DomainAncestral coatomer element 1, Sec16/Sec31Interproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR040251FamilyProtein transport protein SEC31-likeInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13923SEC31-RELATED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005198Molecular Functionstructural molecule activityInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0007029Biological Processendoplasmic reticulum organizationInterproscan
GO:0030127Cellular ComponentCOPII vesicle coatInterproscan
GO:0070971Cellular Componentendoplasmic reticulum exit siteInterproscan
GO:0090110Biological ProcessCOPII-coated vesicle cargo loadingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14005SEC31; protein transport protein SEC31-Secretion systemko02044deepkoala

Expression pattern
 Expression trend for OS493_026813-T1 global co-expression network
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