Detailed information of OS493_026803-T1 in Lophelia pertusa

Genomic Location: scaffold_140:465321...480425
NR annotation: KAJ7383617.1, AT-rich interactive domain-containing protein 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E9Q7E2AT-rich interactive domain-containing protein 2 OS=Mus musculus OX=10090 GN=Arid2 PE=1 SV=1
Q68CP9AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2 PE=1 SV=2
Q09441SWI/SNF chromatin remodeling complex subunit swsn-7 OS=Caenorhabditis elegans OX=6239 GN=swsn-7 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02257RFX_DNA_bindingRFX DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003150DomainDNA-binding RFX-type winged-helix domainInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR052406FamilyChromatin Remodeling Complex ComponentInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22970AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0070603Cellular ComponentSWI/SNF superfamily-type complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11765ARID2; AT-rich interactive domain-containing protein 2-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_026803-T1 global co-expression network
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