Detailed information of OS493_026738-T1 in Lophelia pertusa

Genomic Location: scaffold_139:852254...865826
NR annotation: KAJ7390226.1, Retinoschisin 1a [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9W6R5Retinoschisin OS=Takifugu rubripes OX=31033 GN=xlrs1 PE=3 SV=1
Q9Z1L4Retinoschisin OS=Mus musculus OX=10090 GN=Rs1 PE=1 SV=1
Q0V8T0Contactin-associated protein-like 5 OS=Canis lupus familiaris OX=9615 GN=CNTNAP5 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01822WSCWSC domainDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24543MULTICOPPER OXIDASE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
----

Expression pattern
 Expression trend for OS493_026738-T1 global co-expression network
TOP