Detailed information of OS493_026705-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_026705-T1RETINOBLASTOMA-BINDING PROTEIN 6scaffold_139535222544690-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UFD|DWNN

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08783DWNNDWNN domainDomainInterproscan
PF13696zf-CCHC_2Zinc knuckleDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR014891DomainDWNN domainInterproscan
IPR025829DomainZinc knuckle CX2CX3GHX4CInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15439RETINOBLASTOMA-BINDING PROTEIN 6Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

Expression pattern
 1. Expression trend for OS493_026705-T1 global RNA-seq network
TOP