Detailed information of OS493_026663-T1 in Lophelia pertusa

Genomic Location: scaffold_139:69000...149102
NR annotation: KAJ7390156.1, hypothetical protein OS493_026663 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P78527DNA-dependent protein kinase catalytic subunit OS=Homo sapiens OX=9606 GN=PRKDC PE=1 SV=3
Q8QGX4DNA-dependent protein kinase catalytic subunit OS=Gallus gallus OX=9031 GN=PRKDC PE=2 SV=1
Q8WN22DNA-dependent protein kinase catalytic subunit OS=Canis lupus familiaris OX=9615 GN=PRKDC PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20500DNA-PKcs_NDNA-PKcs, N-terminalRepeatInterproscan
PF02259FATFAT domainRepeatInterproscan
PF02260FATCFATC domainFamilyInterproscan
PF20502DNAPKcs_CC1-2DNA-dependent protein kinase catalytic subunit, CC1/2RepeatInterproscan
PF19704DNAPKcs_CC5DNA-PKcs, CC5RepeatInterproscan
PF08163DNAPKcs_CC3DNA-dependent protein kinase catalytic subunit, CC3RepeatInterproscan
PF00454PI3_PI4_kinasePhosphatidylinositol 3- and 4-kinaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR012582DomainDNA-dependent protein kinase catalytic subunit, CC3Interproscan
IPR046804DomainDNA-PKcs, N-terminalInterproscan
IPR036940Homologous_superfamilyPhosphatidylinositol 3-/4-kinase, catalytic domain superfamilyInterproscan
IPR050517FamilyDNA Damage Response and Repair KinaseInterproscan
IPR011989Homologous_superfamilyArmadillo-like helicalInterproscan
IPR003152DomainFATC domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR037706DomainDNA-dependent protein kinase catalytic subunit, catalytic domainInterproscan
IPR014009DomainPIK-related kinaseInterproscan
IPR000403DomainPhosphatidylinositol 3-/4-kinase, catalytic domainInterproscan
IPR003151DomainPIK-related kinase, FATInterproscan
IPR018936Conserved_sitePhosphatidylinositol 3/4-kinase, conserved siteInterproscan
IPR046803DomainDNA-dependent protein kinase catalytic subunit, CC1/2Interproscan
IPR045581DomainDNA-dependent protein kinase catalytic subunit, CC5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11139ATAXIA TELANGIECTASIA MUTATED ATM -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004677Molecular FunctionDNA-dependent protein kinase activityInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0016301Molecular Functionkinase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06642PRKDC; DNA-dependent protein kinase catalytic subunitEC:2.7.11.1
DNA repair and recombination proteinsko03400deepkoala

Expression pattern
 Expression trend for OS493_026663-T1 global co-expression network
TOP