Detailed information of OS493_026624-T1 in Lophelia pertusa

Genomic Location: scaffold_138:733426...734459
NR annotation: KAJ7327746.1, Heart- and neural crest derivatives-expressed protein 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P57102Heart- and neural crest derivatives-expressed protein 2 OS=Danio rerio OX=7955 GN=hand2 PE=2 SV=1
P61296Heart- and neural crest derivatives-expressed protein 2 OS=Homo sapiens OX=9606 GN=HAND2 PE=1 SV=1
Q61039Heart- and neural crest derivatives-expressed protein 2 OS=Mus musculus OX=10090 GN=Hand2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR050283FamilyE-box Binding Transcriptional RegulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032502Biological Processdevelopmental processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18486HAND2; heart-and neural crest derivatives-expressed protein 2-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_026624-T1 global co-expression network
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