Detailed information of OS493_026603-T1 in Lophelia pertusa

Genomic Location: scaffold_138:488469...491148
NR annotation: KAJ7327725.1, 40S ribosomal protein S3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P47835Small ribosomal subunit protein uS3B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1
Q3T169Small ribosomal subunit protein uS3 OS=Bos taurus OX=9913 GN=RPS3 PE=2 SV=1
P23396Small ribosomal subunit protein uS3 OS=Homo sapiens OX=9606 GN=RPS3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07650KH_2KH domainDomainInterproscan
PF00189Ribosomal_S3_CRibosomal protein S3, C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009019Homologous_superfamilyK homology domain superfamily, prokaryotic typeInterproscan
IPR015946Homologous_superfamilyK homology domain-like, alpha/betaInterproscan
IPR004044DomainK Homology domain, type 2Interproscan
IPR005703FamilySmall ribosomal subunit protein uS3, eukaryotic/archaealInterproscan
IPR036419Homologous_superfamilyRibosomal protein S3, C-terminal domain superfamilyInterproscan
IPR001351DomainSmall ribosomal subunit protein uS3, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR1176030S/40S RIBOSOMAL PROTEIN S3Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0022627Cellular Componentcytosolic small ribosomal subunitInterproscan
GO:2001235Biological Processpositive regulation of apoptotic signaling pathwayInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0015935Cellular Componentsmall ribosomal subunitInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02985RP-S3e, RPS3; small subunit ribosomal protein S3e-Ribosomeko03011deepkoala

Expression pattern
 Expression trend for OS493_026603-T1 global co-expression network
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