Detailed information of OS493_026519-T1 in Lophelia pertusa

Genomic Location: scaffold_137:521843...548223
NR annotation: KAJ7356136.1, hypothetical protein OS493_026519 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5VTB9E3 ubiquitin-protein ligase RNF220 OS=Homo sapiens OX=9606 GN=RNF220 PE=1 SV=1
Q6PDX6E3 ubiquitin-protein ligase Rnf220 OS=Mus musculus OX=10090 GN=Rnf220 PE=1 SV=1
Q08DV5E3 ubiquitin-protein ligase RNF220 OS=Bos taurus OX=9913 GN=RNF220 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15926RNF220E3 ubiquitin-protein ligase RNF220FamilyInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR052443FamilyE3 ubiquitin-protein ligase RNF220-likeInterproscan
IPR031824DomainE3 ubiquitin-protein ligase RNF220, middle domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR040178DomainE3 ubiquitin-protein ligase RNF220, RING fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13459UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K25174RNF220; E3 ubiquitin-protein ligase RNF220EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_026519-T1 global co-expression network
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