Detailed information of OS493_026512-T1 in Lophelia pertusa

Genomic Location: scaffold_137:446391...457600
NR annotation: KAJ7356131.1, hypothetical protein OS493_026512 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P13623Nuclear factor 1 X-type OS=Mesocricetus auratus OX=10036 GN=NFIX PE=2 SV=1
Q12857Nuclear factor 1 A-type OS=Homo sapiens OX=9606 GN=NFIA PE=1 SV=2
P09414Nuclear factor 1 A-type OS=Rattus norvegicus OX=10116 GN=Nfia PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00859CTF_NFICTF/NF-I family transcription modulation regionFamilyInterproscan
PF10524NfI_DNAbd_pre-NNuclear factor I protein pre-N-terminusFamilyInterproscan
PF03165MH1MH1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000647FamilyCTF transcription factor/nuclear factor 1Interproscan
IPR019548DomainCTF transcription factor/nuclear factor 1, N-terminalInterproscan
IPR003619DomainMAD homology 1, Dwarfin-typeInterproscan
IPR020604DomainCTF transcription factor/nuclear factor 1, DNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11492NUCLEAR FACTOR IInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

Expression pattern
 Expression trend for OS493_026512-T1 global co-expression network
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