Detailed information of OS493_026451-T1 in Lophelia pertusa

Genomic Location: scaffold_136:825742...844303
NR annotation: KAJ7371350.1, development of secondary male sexual characteriztics [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P52632Signal transducer and activator of transcription 5B OS=Rattus norvegicus OX=10116 GN=Stat5b PE=1 SV=1
P42232Signal transducer and activator of transcription 5B OS=Mus musculus OX=10090 GN=Stat5b PE=1 SV=1
P51692Signal transducer and activator of transcription 5B OS=Homo sapiens OX=9606 GN=STAT5B PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00017SH2SH2 domainDomainInterproscan
PF01017STAT_alphaSTAT protein, all-alpha domainFamilyInterproscan
PF21354STAT_linkerSignal transducer and activator of transcription, linker domainDomainInterproscan
PF02865STAT_intSTAT protein, protein interaction domainDomainInterproscan
PF02864STAT_bindSTAT protein, DNA binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000980DomainSH2 domainInterproscan
IPR036860Homologous_superfamilySH2 domain superfamilyInterproscan
IPR013800DomainSTAT transcription factor, all-alpha domainInterproscan
IPR048988DomainSignal transducer and activator of transcription, linker domainInterproscan
IPR013799DomainSTAT transcription factor, protein interactionInterproscan
IPR015988Homologous_superfamilySTAT transcription factor, coiled coilInterproscan
IPR001217FamilyTranscription factor STATInterproscan
IPR036535Homologous_superfamilySTAT transcription factor, N-terminal domain superfamilyInterproscan
IPR013801DomainSTAT transcription factor, DNA-bindingInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR012345Homologous_superfamilySTAT transcription factor, DNA-binding, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11801SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTIONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006952Biological Processdefense responseInterproscan
GO:0007259Biological Processcell surface receptor signaling pathway via JAK-STATInterproscan
GO:0042127Biological Processregulation of cell population proliferationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11224STAT5B; signal transducer and activator of transcription 5B-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_026451-T1 global co-expression network
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