Detailed information of OS493_026334-T1 in Lophelia pertusa

Genomic Location: scaffold_134:1017652...1040500
NR annotation: KAJ7383800.1, extracellular matrix [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5SZK8FRAS1-related extracellular matrix protein 2 OS=Homo sapiens OX=9606 GN=FREM2 PE=1 SV=3
Q6NVD0FRAS1-related extracellular matrix protein 2 OS=Mus musculus OX=10090 GN=Frem2 PE=1 SV=2
Q9GV77Extracellular matrix protein 3 OS=Lytechinus variegatus OX=7654 GN=ECM3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03160Calx-betaCalx-beta domainDomainInterproscan
PF16184Cadherin_3Cadherin-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003644DomainNa-Ca exchanger/integrin-beta4Interproscan
IPR039005RepeatCSPG repeatInterproscan
IPR038081Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR051561FamilyFRAS1-related extracellular matrixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45739MATRIX PROTEIN, PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007154Biological Processcell communicationInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

Expression pattern
 Expression trend for OS493_026334-T1 global co-expression network
TOP