Detailed information of OS493_026327-T1 in Lophelia pertusa

Genomic Location: scaffold_134:943851...955982
NR annotation: KAJ7383793.1, E3 ubiquitin-protein ligase Jade-2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6GQJ2Protein Jade-1 OS=Xenopus laevis OX=8355 GN=jade1 PE=2 SV=1
Q6ZPI0Protein Jade-1 OS=Mus musculus OX=10090 GN=Jade1 PE=1 SV=2
Q6IE81Protein Jade-1 OS=Homo sapiens OX=9606 GN=JADE1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13832zf-HC5HC2H_2PHD-zinc-finger like domainDomainInterproscan
PF13831PHD_2PHD-fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR034732DomainExtended PHD (ePHD) domainInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR050701FamilyHistone Modification RegulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13793PHD FINGER PROTEINSInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11347JADE1, PHF17; protein Jade-1-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_026327-T1 global co-expression network
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