Detailed information of OS493_026091-T1 in Lophelia pertusa

Genomic Location: scaffold_132:528888...531959
NR annotation: KAJ7327812.1, Doublesex- and mab-3- transcription factor [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q90WM5Doublesex- and mab-3-related transcription factor 3 OS=Takifugu rubripes OX=31033 GN=dmrt3 PE=2 SV=2
Q76L87Doublesex- and mab-3-related transcription factor A2 OS=Oryzias latipes OX=8090 GN=dmrta2 PE=3 SV=1
P83758Doublesex- and mab-3-related transcription factor 3a OS=Danio rerio OX=7955 GN=dmrt3a PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13240zinc_ribbon_2zinc-ribbon domainDomainInterproscan
PF03474DMADMRTA motifDomainInterproscan
PF00751DMDM DNA binding domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036407Homologous_superfamilyDM DNA-binding domain superfamilyInterproscan
IPR001275DomainDM DNA-binding domainInterproscan
IPR026870DomainZinc-ribbon domainInterproscan
IPR005173DomainDMRTA motifInterproscan
IPR026607FamilyDMRT familyInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12322DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007548Biological Processsex differentiationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_026091-T1 global co-expression network
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