Detailed information of OS493_025908-T1 in Lophelia pertusa

Genomic Location: scaffold_130:949337...952432
NR annotation: KAJ7371439.1, Hyaluronan and proteoglycan link protein 3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P03994Hyaluronan and proteoglycan link protein 1 OS=Rattus norvegicus OX=10116 GN=Hapln1 PE=1 SV=2
Q9QUP5Hyaluronan and proteoglycan link protein 1 OS=Mus musculus OX=10090 GN=Hapln1 PE=1 SV=1
P16112Aggrecan core protein OS=Homo sapiens OX=9606 GN=ACAN PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00193XlinkExtracellular link domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR000538DomainLink domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR043210FamilyCD44 antigen-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10225HYALURONAN RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005540Molecular Functionhyaluronic acid bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06851HAPLN2; hyaluronan and proteoglycan link protein 2-Glycosaminoglycan binding proteinsko00536deepkoala

Expression pattern
 Expression trend for OS493_025908-T1 global co-expression network
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