Detailed information of OS493_025907-T1 in Lophelia pertusa

Genomic Location: scaffold_130:921770...924252
NR annotation: KAJ7371438.1, Hyaluronan and proteoglycan link protein 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P55252Hyaluronan and proteoglycan link protein 1 OS=Bos taurus OX=9913 GN=HAPLN1 PE=2 SV=1
Q28381Hyaluronan and proteoglycan link protein 1 OS=Equus caballus OX=9796 GN=HAPLN1 PE=2 SV=1
P10915Hyaluronan and proteoglycan link protein 1 OS=Homo sapiens OX=9606 GN=HAPLN1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00193XlinkExtracellular link domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043210FamilyCD44 antigen-likeInterproscan
IPR000538DomainLink domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10225HYALURONAN RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005540Molecular Functionhyaluronic acid bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

Expression pattern
 Expression trend for OS493_025907-T1 global co-expression network
TOP