Detailed information of OS493_025905-T1 in Lophelia pertusa

Genomic Location: scaffold_130:894946...896029
NR annotation: KAJ7371436.1, Hyaluronan and proteoglycan link protein 3, partial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P16112Aggrecan core protein OS=Homo sapiens OX=9606 GN=ACAN PE=1 SV=3
Q28670Aggrecan core protein OS=Oryctolagus cuniculus OX=9986 GN=ACAN PE=2 SV=2
Q90953Versican core protein OS=Gallus gallus OX=9031 GN=VCAN PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00193XlinkExtracellular link domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000538DomainLink domainInterproscan
IPR043210FamilyCD44 antigen-likeInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10225HYALURONAN RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005540Molecular Functionhyaluronic acid bindingInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

Expression pattern
 Expression trend for OS493_025905-T1 global co-expression network
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