Gene detail

Detailed information of OS493_025783-T1 in Lophelia pertusa

Genomic Location: scaffold_129:398719...399788
NR annotation: KAJ7377889.1, hypothetical protein OS493_025783 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q01798	Escargot/snail protein homolog (Fragment) OS=Oryzias latipes OX=8090 PE=3 SV=1
P31509	Escargot/snail protein homolog (Fragment) OS=Cryptops anomalans OX=1418174 PE=3 SV=1
Q02027	Escargot/snail protein homolog (Fragment) OS=Psychoda cinerea OX=7202 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13912	zf-C2H2_6	C2H2-type zinc finger	Domain	Interproscan
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR050527	Family	Snail/Krueppel C2H2-type Zinc-finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24388	ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05706	SNAI2, SLUG; snail 2	-	Transcription factors	ko03000	deepkoala

Expression pattern