Detailed information of OS493_025776-T1 in Lophelia pertusa

Genomic Location: scaffold_129:294672...299057
NR annotation: KAJ7377882.1, 26S proteasome non-ATPase regulatory subunit 6 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1500826S proteasome non-ATPase regulatory subunit 6 OS=Homo sapiens OX=9606 GN=PSMD6 PE=1 SV=1
Q99JI426S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus OX=10090 GN=Psmd6 PE=1 SV=1
Q3T0B226S proteasome non-ATPase regulatory subunit 6 OS=Bos taurus OX=9913 GN=PSMD6 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10602RPN726S proteasome subunit RPN7RepeatInterproscan
PF21154RPN7_PSMD6_C26S proteasome regulatory subunit RPN7/PSMD6 C-terminal helixDomainInterproscan
PF01399PCIPCI domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045135Domain26S proteasome regulatory subunit Rpn7, N-terminalInterproscan
IPR000717DomainProteasome component (PCI) domainInterproscan
IPR049549Domain26S proteasome regulatory subunit RPN7/PSMD6, C-terminal helixInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019585Family26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR1414526S PROTESOME SUBUNIT 6Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005838Cellular Componentproteasome regulatory particleInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03037PSMD6, RPN7; 26S proteasome regulatory subunit N7-Proteasomeko03051deepkoala

Expression pattern
 Expression trend for OS493_025776-T1 global co-expression network
TOP