Detailed information of OS493_025650-T1 in Lophelia pertusa

Genomic Location: scaffold_127:805136...813358
NR annotation: KAJ7390396.1, hypothetical protein OS493_025650 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5XEP2Hsp70-Hsp90 organizing protein 2 OS=Arabidopsis thaliana OX=3702 GN=HOP2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF13431TPR_17Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47678TETRATRICOPEPTIDE REPEAT PROTEIN 31Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

Expression pattern
 Expression trend for OS493_025650-T1 global co-expression network
TOP