Detailed information of OS493_025612-T1 in Lophelia pertusa

Genomic Location: scaffold_127:516287...524232
NR annotation: KAJ7390361.1, hypothetical protein OS493_025612 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01410COLFIFibrillar collagen C-terminal domainFamilyInterproscan
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000885DomainFibrillar collagen, C-terminalInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR050632FamilyNematode Cuticular CollagenInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24637COLLAGENInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005201Molecular Functionextracellular matrix structural constituentInterproscan

Expression pattern
 Expression trend for OS493_025612-T1 global co-expression network
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