Detailed information of OS493_025474-T1 in Lophelia pertusa

Genomic Location: scaffold_125:886940...892001
NR annotation: KAJ7356365.1, DNA-binding transcription factor [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5E9S2Nuclear transcription factor Y subunit alpha OS=Bos taurus OX=9913 GN=NFYA PE=2 SV=1
P18576Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus OX=10116 GN=Nfya PE=1 SV=1
P23708Nuclear transcription factor Y subunit alpha OS=Mus musculus OX=10090 GN=Nfya PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02045CBFB_NFYACCAAT-binding transcription factor (CBF-B/NF-YA) subunit BFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001289FamilyNuclear transcription factor Y subunit AInterproscan
IPR018362Conserved_siteCCAAT-binding factor, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12632TRANSCRIPTION FACTOR NF-Y ALPHA-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016602Cellular ComponentCCAAT-binding factor complexInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08064NFYA, HAP2; nuclear transcription factor Y, alpha-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_025474-T1 global co-expression network
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