Detailed information of OS493_025380-T1 in Lophelia pertusa

Genomic Location: scaffold_124:336400...341357
NR annotation: KAJ7371480.1, hypothetical protein OS493_025380 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q90268Paired box protein Pax-2a OS=Danio rerio OX=7955 GN=pax2a PE=2 SV=2
Q02962Paired box protein Pax-2 OS=Homo sapiens OX=9606 GN=PAX2 PE=1 SV=4
O57685Paired box protein Pax-2-A OS=Xenopus laevis OX=8355 GN=pax2-a PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00292PAX'Paired box' domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001523DomainPaired domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR043565FamilyPAX familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45636PAIRED BOX PROTEIN PAX-6-RELATED-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0048856Biological Processanatomical structure developmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15608PAX2; paired box protein 2-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_025380-T1 global co-expression network
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