Detailed information of OS493_025194-T1 in Lophelia pertusa

Genomic Location: scaffold_121:1147707...1154819
NR annotation: KAJ7390489.1, Eukaryotic translation initiation factor 3 subunit M [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A7SPX9Eukaryotic translation initiation factor 3 subunit M OS=Nematostella vectensis OX=45351 GN=v1g192238 PE=3 SV=1
Q7L2H7Eukaryotic translation initiation factor 3 subunit M OS=Homo sapiens OX=9606 GN=EIF3M PE=1 SV=1
Q99JX4Eukaryotic translation initiation factor 3 subunit M OS=Mus musculus OX=10090 GN=Eif3m PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18005eIF3m_C_helixeIF3 subunit M, C-terminal helixDomainInterproscan
PF01399PCIPCI domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027528FamilyEukaryotic translation initiation factor 3 subunit MInterproscan
IPR045237FamilyEukaryotic translation initiation factor 3 subunit M eIF3m/COP9 signalosome complex subunit 7 COPS7Interproscan
IPR040750DomaineIF3 subunit M, C-terminal helix domainInterproscan
IPR000717DomainProteasome component (PCI) domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15350COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005852Cellular Componenteukaryotic translation initiation factor 3 complexInterproscan
GO:0002183Biological Processcytoplasmic translational initiationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15030EIF3M; translation initiation factor 3 subunit M-Translation factorsko03012deepkoala

Expression pattern
 Expression trend for OS493_025194-T1 global co-expression network
TOP