Detailed information of OS493_025095-T1 in Lophelia pertusa

Genomic Location: scaffold_120:967517...976512
NR annotation: KAJ7328215.1, UV excision repair protein RAD23 B [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A3KMV2UV excision repair protein RAD23 homolog A OS=Bos taurus OX=9913 GN=RAD23A PE=2 SV=1
P54728UV excision repair protein RAD23 homolog B OS=Mus musculus OX=10090 GN=Rad23b PE=1 SV=2
P54726UV excision repair protein RAD23 homolog A OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyULD|UBL|NEDD8
Ubiquitin FamilyULD|UFD/UBQ|UBQ_PIM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00627UBAUBA/TS-N domainDomainInterproscan
PF00240ubiquitinUbiquitin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004806FamilyUV excision repair protein Rad23Interproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR029071Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR000626DomainUbiquitin-like domainInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10621UV EXCISION REPAIR PROTEIN RAD23Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0031593Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0070628Molecular Functionproteasome bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10839RAD23, HR23; UV excision repair protein RAD23-DNA repair and recombination proteinsko03400deepkoala

Expression pattern
 Expression trend for OS493_025095-T1 global co-expression network
TOP