Detailed information of OS493_024777-T1 in Lophelia pertusa

Genomic Location: scaffold_117:676588...676935
NR annotation: KAJ7378112.1, hypothetical protein OS493_024777 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2RU54Homeobox protein HMX2 OS=Homo sapiens OX=9606 GN=HMX2 PE=1 SV=1
P43687Homeobox protein HMX2 OS=Mus musculus OX=10090 GN=Hmx2 PE=2 SV=3
Q9BZE3BarH-like 1 homeobox protein OS=Homo sapiens OX=9606 GN=BARHL1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR020479DomainHomeobox domain, metazoaInterproscan
IPR042247FamilyT-cell leukemia homeobox protein 1/2/3Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45921IP01054PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0048513Biological Processanimal organ developmentInterproscan

Expression pattern
 Expression trend for OS493_024777-T1 global co-expression network
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