Detailed information of OS493_024713-T1 in Lophelia pertusa

Genomic Location: scaffold_117:153239...164567
NR annotation: KAJ7378051.1, hypothetical protein OS493_024713 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P70326T-box transcription factor TBX5 OS=Mus musculus OX=10090 GN=Tbx5 PE=1 SV=2
P57082T-box transcription factor TBX4 OS=Homo sapiens OX=9606 GN=TBX4 PE=1 SV=2
P70325T-box transcription factor TBX4 OS=Mus musculus OX=10090 GN=Tbx4 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00907T-boxT-boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036960Homologous_superfamilyT-box superfamilyInterproscan
IPR001699FamilyT-box transcription factorInterproscan
IPR046360DomainT-box transcription factor, DNA-binding domainInterproscan
IPR018186Conserved_siteTranscription factor, T-box, conserved siteInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11267T-BOX PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0001708Biological Processcell fate specificationInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan

Expression pattern
 Expression trend for OS493_024713-T1 global co-expression network
TOP