Detailed information of OS493_024515-T1 in Lophelia pertusa

Genomic Location: scaffold_114:1070190...1082079
NR annotation: KAJ7328594.1, hypothetical protein OS493_024515 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3CQD1Peptide chain release factor 1 OS=Orientia tsutsugamushi (strain Ikeda) OX=334380 GN=prfA PE=3 SV=1
A5CCS8Peptide chain release factor 1 OS=Orientia tsutsugamushi (strain Boryong) OX=357244 GN=prfA PE=3 SV=1
Q67TD5Peptide chain release factor 1 OS=Symbiobacterium thermophilum (strain DSM 24528 / JCM 14929 / IAM 14863 / T) OX=292459 GN=prfA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00472RF-1RF-1 domainFamilyInterproscan
PF03462PCRFPCRF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000352DomainPeptide chain release factor class IInterproscan
IPR045853Homologous_superfamilyPeptide chain release factor class I superfamilyInterproscan
IPR050057FamilyProkaryotic/Mitochondrial Release FactorInterproscan
IPR005139DomainPeptide chain release factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43804LD18447PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003747Molecular Functiontranslation release factor activityInterproscan
GO:0006415Biological Processtranslational terminationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02835prfA, MTRF1, MRF1; peptide chain release factor 1-Translation factorsko03012deepkoala

Expression pattern
 Expression trend for OS493_024515-T1 global co-expression network
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