Detailed information of OS493_024400-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_024400-T1VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEINscaffold_113769156778133+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00637ClathrinRegion in Clathrin and VPSRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000547RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23323VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005768Cellular ComponentendosomeInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0006904Biological Processvesicle docking involved in exocytosisInterproscan
GO:0007032Biological Processendosome organizationInterproscan
GO:0007033Biological Processvacuole organizationInterproscan
GO:0007040Biological Processlysosome organizationInterproscan
GO:0008333Biological Processendosome to lysosome transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0030674Molecular Functionprotein-macromolecule adaptor activityInterproscan
GO:0030897Cellular ComponentHOPS complexInterproscan
GO:0048284Biological Processorganelle fusionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_024400-T1 global RNA-seq network
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