Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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Genomic Location: scaffold_112:562021...574166
NR annotation: KAJ7371591.1, hypothetical protein OS493_024267, partial [Desmophyllum pertusum]
| CDS | |
| OS493_024267-T1 | |
| Transcript |
| OS493_024267-T1 |
| Protein |
| OS493_024267-T1 |
| Uniprot term | Description |
|---|---|
| Q96RW7 | Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2 |
| Q05793 | Basement membrane-specific heparan sulfate proteoglycan core protein OS=Mus musculus OX=10090 GN=Hspg2 PE=1 SV=1 |
| G5EG78 | Peroxidasin homolog pxn-2 OS=Caenorhabditis elegans OX=6239 GN=pxn-2 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01390 | SEA | SEA domain | Family | Interproscan |
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR050958 | Family | Cell Adhesion and Cytoskeletal Organization | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR011009 | Homologous_superfamily | Protein kinase-like domain superfamily | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR000082 | Domain | SEA domain | Interproscan |
| IPR017441 | Binding_site | Protein kinase, ATP binding site | Interproscan |
| IPR036364 | Homologous_superfamily | SEA domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45080 | CONTACTIN 5 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0007156 | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0008046 | Molecular Function | axon guidance receptor activity | Interproscan |
| GO:0030424 | Cellular Component | axon | Interproscan |
| GO:0043025 | Cellular Component | neuronal cell body | Interproscan |
| GO:0050808 | Biological Process | synapse organization | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| Expression trend for OS493_024267-T1 global co-expression network |