Detailed information of OS493_024253-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_024253-T1CTX-RELATED TYPE I TRANSMEMBRANE PROTEINscaffold_112307638319326+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00089TrypsinTrypsinDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF13895Ig_2Immunoglobulin domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000998DomainMAM domainInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR001314FamilyPeptidase S1A, chymotrypsin familyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR018114Active_siteSerine proteases, trypsin family, histidine active siteInterproscan
IPR033116Active_siteSerine proteases, trypsin family, serine active siteInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR051170FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12231CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_024253-T1 global RNA-seq network
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