Detailed information of OS493_024087-T1 in Lophelia pertusa

Genomic Location: scaffold_110:857649...868722
NR annotation: KAJ7384073.1, hypothetical protein OS493_024087 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IW19Aprataxin and PNK-like factor OS=Homo sapiens OX=9606 GN=APLF PE=1 SV=1
Q9D842Aprataxin and PNK-like factor OS=Mus musculus OX=10090 GN=Aplf PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10283zf-CCHHPBZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019406DomainAprataxin and PNK-like factor, PBZ domainInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR039253FamilyAprataxin and PNK-like factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21315UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003906Molecular FunctionDNA-(apurinic or apyrimidinic site) endonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0008408Molecular Function3'-5' exonuclease activityInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13295APLF; aprataxin and PNK-like factorEC:3.1.-.-
DNA repair and recombination proteinsko03400deepkoala

Expression pattern
 Expression trend for OS493_024087-T1 global co-expression network
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