Detailed information of OS493_023902-T1 in Lophelia pertusa

Genomic Location: scaffold_108:539366...548729
NR annotation: KAJ7328633.1, hypothetical protein OS493_023902 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q83HI6Dihydroxy-acid dehydratase OS=Tropheryma whipplei (strain TW08/27) OX=218496 GN=ilvD PE=3 SV=1
Q83GP9Dihydroxy-acid dehydratase OS=Tropheryma whipplei (strain Twist) OX=203267 GN=ilvD PE=3 SV=1
Q49UX2Dihydroxy-acid dehydratase 2 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=ilvD2 PE=3 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilyTF_bZIP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00920ILVD_EDDDehydratase familyFamilyInterproscan
PF21300LbR_Ice_bindGrass antifreeze beta rollRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037237Homologous_superfamilyIlvD/EDD, N-terminal domainInterproscan
IPR000581FamilyDihydroxy-acid/6-phosphogluconate dehydrataseInterproscan
IPR050165FamilyDihydroxy-acid dehydratase IlvD/EddInterproscan
IPR048518RepeatIce-binding protein, beta rollInterproscan
IPR020558Conserved_siteDihydroxy-acid/6-phosphogluconate dehydratase, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21000DIHYDROXY-ACID DEHYDRATASE DADInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016836Molecular Functionhydro-lyase activityInterproscan
GO:0004160Molecular Functiondihydroxy-acid dehydratase activityInterproscan
GO:0009082Biological Processbranched-chain amino acid biosynthetic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

Expression pattern
 Expression trend for OS493_023902-T1 global co-expression network
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