Detailed information of OS493_023884-T1 in Lophelia pertusa

Genomic Location: scaffold_108:222583...230651
NR annotation: KAJ7328615.1, F-box/LRR-repeat protein 5 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
C0HAC0F-box/LRR-repeat protein 5 OS=Salmo salar OX=8030 GN=fbxl5 PE=2 SV=1
Q8C2S5F-box/LRR-repeat protein 5 OS=Mus musculus OX=10090 GN=Fbxl5 PE=2 SV=2
A2VE78F-box/LRR-repeat protein 5 OS=Bos taurus OX=9913 GN=FBXL5 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|F-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01814HemerythrinHemerythrin HHE cation binding domainDomainInterproscan
PF13516LRR_6Leucine Rich repeatRepeatInterproscan
PF12937F-box-likeF-box-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR012312DomainHemerythrin-likeInterproscan
IPR001810DomainF-box domainInterproscan
IPR006553RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR036047Homologous_superfamilyF-box-like domain superfamilyInterproscan
IPR050648FamilyF-box/Leucine-rich repeatInterproscan
IPR045808DomainFBXL5-like, hemerythrin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR BInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006879Biological Processintracellular iron ion homeostasisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10271FBXL5; F-box and leucine-rich repeat protein 5-Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_023884-T1 global co-expression network
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