Detailed information of OS493_023849-T1 in Lophelia pertusa

Genomic Location: scaffold_107:1090795...1104955
NR annotation: KAJ7357713.1, Mothers against decapentaplegic 5 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9R1V3Mothers against decapentaplegic homolog 5 OS=Rattus norvegicus OX=10116 GN=Smad5 PE=1 SV=1
Q1JQA2Mothers against decapentaplegic homolog 1 OS=Bos taurus OX=9913 GN=SMAD1 PE=2 SV=1
Q9I962Mothers against decapentaplegic homolog 1 OS=Coturnix japonica OX=93934 GN=SMAD1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03165MH1MH1 domainDomainInterproscan
PF03166MH2MH2 domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003619DomainMAD homology 1, Dwarfin-typeInterproscan
IPR036578Homologous_superfamilySMAD MH1 domain superfamilyInterproscan
IPR001132DomainSMAD domain, Dwarfin-typeInterproscan
IPR013790FamilyDwarfinInterproscan
IPR013019DomainMAD homology, MH1Interproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR017855Homologous_superfamilySMAD-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13703SMADInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007179Biological Processtransforming growth factor beta receptor signaling pathwayInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan
GO:0030509Biological ProcessBMP signaling pathwayInterproscan
GO:0060395Biological ProcessSMAD protein signal transductionInterproscan
GO:0070411Molecular FunctionI-SMAD bindingInterproscan
GO:0071144Cellular Componentheteromeric SMAD protein complexInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04676SMAD1; mothers against decapentaplegic homolog 1-Transcriptional misregulation in cancerko05202deepkoala

Expression pattern
 Expression trend for OS493_023849-T1 global co-expression network
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