Detailed information of OS493_023798-T1 in Lophelia pertusa

Genomic Location: scaffold_107:540859...565303
NR annotation: KAJ7357667.1, Coronin-7 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0V8F1Coronin-7 OS=Bos taurus OX=9913 GN=CORO7 PE=2 SV=1
O35828Coronin-7 OS=Rattus norvegicus OX=10116 GN=Coro7 PE=1 SV=2
P57737Coronin-7 OS=Homo sapiens OX=9606 GN=CORO7 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16300WD40_4Type of WD40 repeatRepeatInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF08953DUF1899Domain of unknown function (DUF1899)RepeatInterproscan
PF12894ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015048DomainDomain of unknown function DUF1899Interproscan
IPR015505FamilyCoroninInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR024977DomainAnaphase-promoting complex subunit 4-like, WD40 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10856CORONINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007015Biological Processactin filament organizationInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18619CORO7; coronin-7-Cytoskeleton proteinsko04812deepkoala

Expression pattern
 Expression trend for OS493_023798-T1 global co-expression network
TOP