Detailed information of OS493_023552-T1 in Lophelia pertusa

Genomic Location: scaffold_105:253806...260040
NR annotation: KAJ7378305.1, General transcription factor 3C polypeptide 4 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BMQ2General transcription factor 3C polypeptide 4 OS=Mus musculus OX=10090 GN=Gtf3c4 PE=1 SV=2
Q9UKN8General transcription factor 3C polypeptide 4 OS=Homo sapiens OX=9606 GN=GTF3C4 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12660zf-TFIIICPutative zinc-finger of transcription factor IIIC complexDomainInterproscan
PF12657TFIIIC_deltaTranscription factor IIIC subunit delta bet-propeller domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR044230FamilyGeneral transcription factor 3C polypeptide 4Interproscan
IPR024764DomainTranscription factor IIIC, putative zinc-fingerInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR024761DomainTranscription factor IIIC, 90kDa subunit, N-terminalInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15496GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 4 FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000127Cellular Componenttranscription factor TFIIIC complexInterproscan
GO:0004402Molecular Functionhistone acetyltransferase activityInterproscan
GO:0006384Biological Processtranscription initiation at RNA polymerase III promoterInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11310GTF3C4, KAT12; general transcription factor 3C polypeptide 4EC:2.3.1.48
Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_023552-T1 global co-expression network
TOP