Detailed information of OS493_023552-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_023552-T1GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 4 FAMILYscaffold_105253806260040-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12657TFIIIC_deltaTranscription factor IIIC subunit delta bet-propeller domainRepeatInterproscan
PF12660zf-TFIIICPutative zinc-finger of transcription factor IIIC complexDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR024761DomainTranscription factor IIIC, 90kDa subunit, N-terminalInterproscan
IPR024764DomainTranscription factor IIIC, putative zinc-fingerInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR044230FamilyGeneral transcription factor 3C polypeptide 4Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR15496GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 4 FAMILYInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000127Cellular Componenttranscription factor TFIIIC complexInterproscan
GO:0004402Molecular Functionhistone acetyltransferase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006384Biological Processtranscription initiation at RNA polymerase III promoterInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_023552-T1 global RNA-seq network
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