Detailed information of OS493_023550-T1 in Lophelia pertusa

Genomic Location: scaffold_105:230673...238908
NR annotation: KAJ7378303.1, hypothetical protein OS493_023550 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9WYJ1L-threonine ammonia-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0356 PE=1 SV=1
Q74FW6L-threonine ammonia-lyase OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) OX=243231 GN=tdcB PE=1 SV=1
P0AGF8L-threonine dehydratase catabolic TdcB OS=Escherichia coli O157:H7 OX=83334 GN=tdcB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00291PALPPyridoxal-phosphate dependent enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036052Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR001926DomainTryptophan synthase beta chain-like, PALP domainInterproscan
IPR044561DomainL-threonine ammonia-lyase, ACT domainInterproscan
IPR050147FamilySerine/Threonine DehydrataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48078THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003941Molecular FunctionL-serine ammonia-lyase activityInterproscan
GO:0004794Molecular Functionthreonine deaminase activityInterproscan
GO:0006565Biological ProcessL-serine catabolic processInterproscan
GO:0006567Biological Processthreonine catabolic processInterproscan
GO:0009097Biological Processisoleucine biosynthetic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01754E4.3.1.19, ilvA, tdcB; threonine dehydrataseEC:4.3.1.19
Valine, leucine and isoleucine biosynthesisko00290deepkoala

Expression pattern
 Expression trend for OS493_023550-T1 global co-expression network
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