Detailed information of OS493_023533-T1 in Lophelia pertusa

Genomic Location: scaffold_105:57490...77686
NR annotation: KAJ7378286.1, Small G protein signaling modulator 3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2KI13Small G protein signaling modulator 3 OS=Bos taurus OX=9913 GN=SGSM3 PE=2 SV=1
Q8VCZ6Small G protein signaling modulator 3 OS=Mus musculus OX=10090 GN=Sgsm3 PE=1 SV=1
Q6P6R7Small G protein signaling modulator 3 OS=Rattus norvegicus OX=10116 GN=Sgsm3 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00018SH3_1SH3 domainDomainInterproscan
PF00566RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004012DomainRUN domainInterproscan
IPR001452DomainSH3 domainInterproscan
IPR000195DomainRab-GAP-TBC domainInterproscan
IPR035969Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR037213Homologous_superfamilyRUN domain superfamilyInterproscan
IPR050302FamilyRab GTPase-activating TBC domain-containing proteinInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47219RAB GTPASE-ACTIVATING PROTEIN 1-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_023533-T1 global co-expression network
TOP