Detailed information of OS493_023503-T1 in Lophelia pertusa

Genomic Location: scaffold_104:971422...972348
NR annotation: KAJ7384174.1, Cleavage polyadenylation factor subunit clp1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A7RG82Protein CLP1 homolog OS=Nematostella vectensis OX=45351 GN=v1g236308 PE=3 SV=1
A2VE01Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Bos taurus OX=9913 GN=CLP1 PE=2 SV=1
Q92989Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Homo sapiens OX=9606 GN=CLP1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06807Clp1Pre-mRNA cleavage complex II protein Clp1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038238Homologous_superfamilyClp1, C-terminal domain superfamilyInterproscan
IPR045116FamilyPolyribonucleotide 5-hydroxyl-kinase Clp1/Grc3Interproscan
IPR010655DomainPre-mRNA cleavage complex subunit Clp1, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12755CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0006388Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0051731Molecular Functionpolynucleotide 5'-hydroxyl-kinase activityInterproscan
GO:0031124Biological ProcessmRNA 3'-end processingInterproscan

Expression pattern
 Expression trend for OS493_023503-T1 global co-expression network
TOP