Detailed information of OS493_023164-T1 in Lophelia pertusa

Genomic Location: scaffold_100:1068611...1087750
NR annotation: KAJ7371823.1, Rho GTPase-activating protein 42 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UNA1Rho GTPase-activating protein 26 OS=Homo sapiens OX=9606 GN=ARHGAP26 PE=1 SV=1
Q6ZQ82Rho GTPase-activating protein 26 OS=Mus musculus OX=10090 GN=Arhgap26 PE=1 SV=3
Q5ZMW5Rho GTPase-activating protein 26 OS=Gallus gallus OX=9031 GN=ARHGAP26 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00620RhoGAPRhoGAP domainDomainInterproscan
PF16746BAR_3BAR domain of APPL familyDomainInterproscan
PF00169PHPH domainDomainInterproscan
PF14604SH3_9Variant SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000198DomainRho GTPase-activating protein domainInterproscan
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR001452DomainSH3 domainInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR047225DomainGRAF, PH domainInterproscan
IPR004148DomainBAR domainInterproscan
IPR047234FamilyGRAF familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12552OLIGOPHRENIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007165Biological Processsignal transductionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005096Molecular FunctionGTPase activator activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20071ARHGAP26, GRAF; Rho GTPase-activating protein 26-Membrane traffickingko04131deepkoala

Expression pattern
 Expression trend for OS493_023164-T1 global co-expression network
TOP