Detailed information of OS493_023013-T1 in Lophelia pertusa

Genomic Location: scaffold_99:843750...853353
NR annotation: KAJ7378478.1, E3 ubiquitin-protein ligase E3D [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09814HECT_2HECT-like Ubiquitin-conjugating enzyme (E2)-bindingDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019193FamilyUbiquitin-conjugating enzyme E2-binding proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31531E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006513Biological Processprotein monoubiquitinationInterproscan
GO:0030332Molecular Functioncyclin bindingInterproscan
GO:0031624Molecular Functionubiquitin conjugating enzyme bindingInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0051865Biological Processprotein autoubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20803UBE3D; ubiquitin-protein ligase E3 DEC:2.3.2.26
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_023013-T1 global co-expression network
TOP