Detailed information of OS493_022979-T1 in Lophelia pertusa

Genomic Location: scaffold_99:423473...425737
NR annotation: KAJ7378445.1, Tumor necrosis factor, alpha-induced protein 3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q4R8W3Tumor necrosis factor alpha-induced protein 3 OS=Macaca fascicularis OX=9541 GN=TNFAIP3 PE=2 SV=1
P21580Tumor necrosis factor alpha-induced protein 3 OS=Homo sapiens OX=9606 GN=TNFAIP3 PE=1 SV=1
Q60769Tumor necrosis factor alpha-induced protein 3 OS=Mus musculus OX=10090 GN=Tnfaip3 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|OTU|OTU
Ubiquitin FamilyUBD|ZnF|ZnF_A20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02338OTUOTU-like cysteine proteaseFamilyInterproscan
PF01754zf-A20A20-like zinc fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002653DomainZinc finger, A20-typeInterproscan
IPR003323DomainOTU domainInterproscan
IPR051346FamilyOTU Domain-Containing DeubiquitinaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13367UBIQUITIN THIOESTERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007010Biological Processcytoskeleton organizationInterproscan
GO:0016477Biological Processcell migrationInterproscan
GO:0030177Biological Processpositive regulation of Wnt signaling pathwayInterproscan
GO:0035523Biological Processprotein K29-linked deubiquitinationInterproscan
GO:0070530Molecular FunctionK63-linked polyubiquitin modification-dependent protein bindingInterproscan
GO:0071947Biological Processprotein deubiquitination involved in ubiquitin-dependent protein catabolic processInterproscan
GO:1990168Biological Processprotein K33-linked deubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11860OTUD7A_B; OTU domain-containing protein 7EC:3.4.19.12
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_022979-T1 global co-expression network
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