Detailed information of OS493_022784-T1 in Lophelia pertusa

Genomic Location: scaffold_97:145199...170130
NR annotation: KAJ7390706.1, tudor domain containing 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A9CPT4Tudor domain-containing protein 1 OS=Oryzias latipes OX=8090 GN=tdrd1 PE=2 SV=1
Q58EK5Tudor domain-containing protein 1 OS=Danio rerio OX=7955 GN=tdrd1 PE=1 SV=2
Q9BXT4Tudor domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TDRD1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00567TUDORTudor domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF01753zf-MYNDMYND fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050621FamilyTudor domain-containingInterproscan
IPR002999DomainTudor domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR035437Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR002893DomainZinc finger, MYND-typeInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22948TUDOR DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18405TDRD1_4_6_7; tudor domain-containing protein 1/4/6/7-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_022784-T1 global co-expression network
TOP